plotLSDs.alldiffs: Plots a heat map of computed LSD values for pairwise.permute.to.zero.lowertri: Permutes a square matrix until all the lower triangular.permute.square: Permutes the rows and columns of a square matrix.pairdiffsTransform.alldiffs: Calculates the differences between nominated pairs of.Oats.dat: Data for an experiment to investigate nitrogen response of 3.num.recode: Recodes the unique values of a vector using the values in a.newfit.asreml: Refits an asreml model with modified model formula using.loadASRemlVersion: Ensures that a specific version of 'asreml' is loaded.linTransform.alldiffs: Calculates a linear transformation of the predictions stored.Ladybird.dat: Data for an experiment to investigate whether ladybirds.iterate.asrtests: Subject the fitted 'asreml.obj' stored in an.is.ame: Tests whether an object is of class ame.is.asrtests: Tests whether an object is of class asrtests.is.alldiffs: Tests whether an object is of class alldiffs.infoCriteria.asreml: Computes AIC and BIC for models.getTestPvalue.asrtests: Gets the p-value for a test recorded in the test.summary.getTestEntry.asrtests: Gets the entry for a test recorded in the test.summary.getFormulae.asreml: Gets the formulae from an asreml object.getASRemlVersionLoaded: Finds the version of asreml that is loaded and returns the.facRename.alldiffs: Renames 'factor's in the 'prediction' component of an.facRecast.alldiffs: Reorders and/or revises the factor levels using the order of.facCombine.alldiffs: Combines several factors into one in the components of an.exploreLSDs.alldiffs: Explores the computed LSD values for pairwise differences.estimateV.asreml: Forms the estimated variance, random or residual matrix for.: Determines the set of significant terms from results stored.chooseModel.asrtests: Determines and records the set of significant terms using an.chooseModel: Determines the set of significant terms using p-values and.ChickpeaEnd: A large data set comprising the end of imaging data from a.changeTerms.asrtests: Adds and drops the specified sets of terms from one or both.
changeModelOnIC.asrtests: Uses information criteria to decide whether to change an.bootREMLRT.asreml: Uses the parametric bootstrap to calculate the p-value for a.asrtests.object: Description of an asrtests object.asremlPlusTips: The randomly-presented, startup tips.asremlPlus-package: Augments 'ASReml-R' in Fitting Mixed Models and Packages.asremlPlus-deprecated: Deprecated Functions in the Package asremlPlus.as.ame: Forms a 'ame' from a 'ame', ensuring.as.asrtests: Forms an asrtests object that stores (i) a fitted asreml.as.alldiffs: Forms an 'alldiffs.object' from the supplied predictions.angular.mod: Applies the modified angular transformation to a vector of.angular: Applies the angular transformation to proportions.alldiffs.object: Description of an alldiffs object.
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